feat: add claude and project CLI commands

Claude command manages .mcp.json files (generate from project, show, add,
remove entries). Project command provides CRUD for projects with profile
assignment management.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

src/cli/src/index.ts

@@ -8,6 +8,8 @@ import { createDescribeCommand } from './commands/describe.js';
 import { createInstanceCommands } from './commands/instances.js';
 import { createApplyCommand } from './commands/apply.js';
 import { createSetupCommand } from './commands/setup.js';
+import { createClaudeCommand } from './commands/claude.js';
+import { createProjectCommand } from './commands/project.js';
 import { ApiClient } from './api-client.js';
 import { loadConfig } from './config/index.js';
 
@@ -86,6 +88,16 @@ export function createProgram(): Command {
     log: (...args) => console.log(...args),
   }));
 
+  program.addCommand(createClaudeCommand({
+    client,
+    log: (...args) => console.log(...args),
+  }));
+
+  program.addCommand(createProjectCommand({
+    client,
+    log: (...args) => console.log(...args),
+  }));
+
   return program;
 }